Microarray Analysis - Data Bioinformatics
Microarray analysis. Chip Data Bioinformatic tools. Array analysis and statistics. Data analysis for DNA, antibody and protein arrays.
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| AMP: Automated Microarray Pipeline - http://www.tm4.org/amp.html The Automated Microarray Pipeline is a series of programs that allow the automated normalization and web publication of microarray data. Data stored in a MADAM-compliant database, like that provided with MADAM, can be automatically downloaded, normalized - [AMP: Automated Microarray Pipeline Read more] |
| DNA Microarray Software - http://rana.lbl.gov/EisenSoftware.htm Michael Eisen's software at Stanford - includes ScanAlyze, Cluster and TreeView. - [DNA Microarray Software Read more] |
| MADAM: MicroArray DAta Manager - http://www.tm4.org/madam.html The Microarray Data Manager, implemented in Java, facilitates the entry of data into a relational database. MADAM guides users through the microarray process from RNA procurement to data analysis, offering intelligent forms to simplify the tracking of exp - [MADAM: MicroArray DAta Manager Read more] |
| MIDAS: Microarray Data Analysis System - http://www.tm4.org/midas.html TIGR?s Microarray Data Analysis System, a Java application, provides users an intuitive interface to design analysis protocols combining one or more normalization and filtering steps. In this way, data from many individual hybridizations can be treated - [MIDAS: Microarray Data Analysis System Read more] |
| NetAffx™ Analysis Center - http://www.affymetrix.com/analysis/index.affx NetAffx™ Analysis Center from Affymetrix enables researchers to correlate GeneChip® microarray data results with array design and annotation information. - [NetAffx™ Analysis Center Read more] |
| Software Utilites for DNA Microarray - http://www.tm4.org/utilities.html Software Utilites for DNA Microarray. ExpressConverter and SlideMap. - [Software Utilites for DNA Microarray Read more] |
| TIGR Multiexperiment Viewer (MeV) - http://www.tm4.org/mev.html Normalized and filtered expression files can be analyzed using TIGR Multiexperiment Viewer (MeV). MeV is a versatile microarray data analysis tool, incorporating sophisticated algorithms for clustering, visualization, classification, statistical analysis - [TIGR Multiexperiment Viewer (MeV) Read more] |